Wikidata:Property proposal/SMARTS

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SMARTS

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Originally proposed at Wikidata:Property proposal/Natural science

Descriptionnotation used for specifying substructural patterns in chemical molecules
RepresentsSMARTS (Q7544680)
Data typeString
Domainstructural class of chemical entities (Q47154513)
Example 1aldehydes (Q101497) → [CX3H1](=O)[#6]
Example 2ketone (Q170744) → [#6][CX3](=O)[#6]
Example 3nitrile (Q333936) → [NX1]#[CX2]
Formatter URLhttps://smarts.plus/smartsview/download_rest?smarts=$1;filetype=png;vmode=0;textdesc=1;depsymbols=1;smartsheading=0 (cf. https://smartsview.zbh.uni-hamburg.de/rest for more details; as this should be a string-datatype property, use of [[MediaWiki:Gadget-AuthorityControl.js]] would be necessary)
See alsocanonical SMILES (P233), isomeric SMILES (P2017)

Motivation

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SMARTS is an extension of SMILES that can be used to describe classes and groups of chemical entities. This line notation is not as popular as SMILES, and is not easy to create even with a proper software, but it's one of the few available methods of describing substructural patterns. We have SMILES for most of organic compounds in WD and I think that in the future SMARTS can be used to help us classify chemical compounds in WD. Zentrum für Bioinformatik of the Universität Hamburg maintain an online service that converts SMARTS notation into graphics and compares SMARTS/SMILES notations: https://smartsview.zbh.uni-hamburg.de/ . Wostr (talk) 20:19, 8 August 2020 (UTC)[reply]

Saehrimnir
Leyo
Snipre
Dcirovic
Walkerma
Egon Willighagen
Denise Slenter
Daniel Mietchen
Kopiersperre
Emily Temple-Wood
Pablo Busatto (Almondega)
Antony Williams (EPA)
TomT0m
Wostr
Devon Fyson
User:DePiep
User:DavRosen
Benjaminabel
99of9
Kubaello
Fractaler
Sebotic
Netha
Hugo
Samuel Clark
Tris T7
Leiem
Christianhauck
SCIdude
Binter
Photocyte
Robert Giessmann
Cord Wiljes
Adriano Rutz
Jonathan Bisson
GrndStt
Ameisenigel
Charles Tapley Hoyt
ChemHobby
Peter Murray-Rust
Erfurth
TiagoLubiana

Notified participants of WikiProject Chemistry

Discussion

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  1.  Support Pamputt (talk) 17:42, 10 August 2020 (UTC)[reply]
  2.  Support --SCIdude (talk) 08:24, 11 August 2020 (UTC)[reply]
  3.  Support --Ameisenigel (talk) 15:04, 12 August 2020 (UTC)[reply]
@Wostr, SCIdude, Ameisenigel: ✓ Done SMARTS notation (P8533) Pamputt (talk) 22:50, 17 August 2020 (UTC)[reply]